STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW49_03080Unannotated protein. (805 aa)    
Predicted Functional Partners:
CQW49_03070
Unannotated protein.
 
     0.891
CQW49_03060
Unannotated protein.
 
     0.883
CQW49_03065
Unannotated protein.
 
   
 0.878
CQW49_11065
Unannotated protein.
 
     0.804
CQW49_04260
Unannotated protein.
 
     0.785
CQW49_03635
Unannotated protein.
 
     0.785
CQW49_21485
Unannotated protein.
  
  
 0.617
CQW49_03640
Unannotated protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.567
CQW49_07015
Unannotated protein.
 
     0.556
CQW49_23465
Unannotated protein.
  
  
 0.548
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.