STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW49_20085Unannotated protein. (260 aa)    
Predicted Functional Partners:
tatA
Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.752
CQW49_20090
Unannotated protein.
       0.742
CQW49_11775
Unannotated protein.
  
   0.734
CQW49_08870
Unannotated protein.
   
 0.728
hflK
Unannotated protein; HflC and HflK could encode or regulate a protease.
   
 0.722
CQW49_02205
Unannotated protein.
   
 
 0.693
bioB
Unannotated protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
     
 0.652
CQW49_20080
Unannotated protein.
       0.589
CQW49_06175
Unannotated protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.578
CQW49_04335
Unannotated protein.
  
 
 0.501
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.