STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW49_18275Unannotated protein. (609 aa)    
Predicted Functional Partners:
CQW49_18270
Unannotated protein.
 
 
 0.968
CQW49_19200
Unannotated protein.
 
 
 0.862
CQW49_14490
Unannotated protein.
 
 
 0.860
CQW49_15525
Unannotated protein.
 
 
 0.859
CQW49_16235
Unannotated protein.
 
 
 0.853
CQW49_19195
Unannotated protein.
  
     0.773
CQW49_23735
Unannotated protein.
 
 
 0.689
CQW49_05725
Unannotated protein.
 
 
 0.627
CQW49_00685
Unannotated protein.
  
 
 0.503
CQW49_21385
Unannotated protein.
  
 
 0.432
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.