STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000178815_02117Unannotated protein. (447 aa)    
Predicted Functional Partners:
CQW49_08030
Unannotated protein.
 
      0.899
CQW49_15335
Unannotated protein.
    0.888
CQW49_08205
Unannotated protein.
    0.805
CQW49_08025
Unannotated protein.
    0.805
GCA_000178815_03545
Unannotated protein.
    0.805
GCA_000178815_02208
Unannotated protein.
    0.789
GCA_000178815_02207
Unannotated protein.
 
    0.777
GCA_000178815_00081
Unannotated protein.
  
     0.497
GCA_000178815_02118
Unannotated protein.
       0.421
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.