STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW49_14410Unannotated protein. (287 aa)    
Predicted Functional Partners:
GCA_000178815_02288
Unannotated protein.
     0.931
CQW49_10910
Unannotated protein.
  
 
 0.598
CQW49_02655
Unannotated protein.
     
 0.558
CQW49_09380
Unannotated protein.
   
    0.556
aroB
Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
     
 0.506
CQW49_04590
Unannotated protein.
 
  
 0.457
gltA
Unannotated protein; Belongs to the citrate synthase family.
  
 
 0.453
CQW49_01820
Unannotated protein.
 
   
 0.443
CQW49_20755
Unannotated protein.
 
 
 0.438
CQW49_06695
Unannotated protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 0.425
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.