STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW49_05970Unannotated protein. (332 aa)    
Predicted Functional Partners:
CQW49_05965
Unannotated protein.
  
 0.961
CQW49_05960
Unannotated protein.
  
 0.952
CQW49_23795
Unannotated protein.
  
 0.797
CQW49_23800
Unannotated protein.
  
 0.795
GCA_000178815_03964
Unannotated protein.
       0.773
macB
Unannotated protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.747
CQW49_23805
Unannotated protein.
  
 0.661
CQW49_19860
Unannotated protein.
 
 
 0.601
CQW49_10360
Unannotated protein.
 
 
 0.588
CQW49_17180
Unannotated protein.
 
 
 0.572
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.