STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU34634.1Luciferase family oxidoreductase, group 1; KEGG: vap:Vapar_0386 luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup. (329 aa)    
Predicted Functional Partners:
ADU34633.1
KEGG: vap:Vapar_6116 hypothetical protein.
       0.670
ADU34631.1
KEGG: vap:Vapar_0385 hypothetical protein.
       0.668
ADU34632.1
PFAM: VanW family protein; glycosyl transferase group 1; KEGG: mxa:MXAN_4997 VanW-like domain-containing protein.
       0.668
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.609
ADU38686.1
Amino acid adenylation domain protein; KEGG: bsu:BSU31960 siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase; TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Male sterility domain.
   
 
 0.493
ADU36867.1
FMN reductase; KEGG: vap:Vapar_2980 NADPH-dependent FMN reductase; TIGRFAM: FMN reductase; PFAM: NADPH-dependent FMN reductase.
 
 
 0.436
ADU38496.1
KEGG: vap:Vapar_3746 amino acid adenylation domain protein; TIGRFAM: amino acid adenylation domain protein; PFAM: condensation domain protein; AMP-dependent synthetase and ligase; phosphopantetheine-binding.
   
 
 0.430
ADU37666.1
KEGG: bam:Bamb_6034 FMN reductase; TIGRFAM: FMN reductase; PFAM: NADPH-dependent FMN reductase.
 
 
 0.405
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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