STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU34708.1PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_0468 lysine exporter protein (LysE/YggA). (215 aa)    
Predicted Functional Partners:
ADU37939.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_2136 lysine exporter protein (LysE/YggA).
  
    0.772
ADU37010.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_2721 lysine exporter protein (LysE/YggA).
  
    0.770
ADU39937.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_5067 lysine exporter protein (LysE/YggA).
  
    0.770
ADU34853.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_0577 lysine exporter protein (LysE/YggA).
  
     0.767
ADU34981.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_0743 lysine exporter protein (LysE/YggA).
  
     0.766
ADU39494.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aav:Aave_3915 lysine exporter protein LysE/YggA.
  
    0.766
ADU34709.1
PFAM: YceI family protein; KEGG: vap:Vapar_0469 YceI family protein; Belongs to the UPF0312 family.
       0.761
ADU35680.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_1345 lysine exporter protein (LysE/YggA).
  
    0.760
ADU34275.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_0047 lysine exporter protein (LysE/YggA).
  
     0.756
ADU34710.1
PFAM: YceI family protein; KEGG: vap:Vapar_0470 YceI family protein; Belongs to the UPF0312 family.
       0.674
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.