STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU34721.1KEGG: bph:Bphy_4343 hypothetical protein. (70 aa)    
Predicted Functional Partners:
ADU34722.1
Flp pilus assembly protein CpaB; KEGG: vei:Veis_0245 SAF domain-containing protein; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein.
       0.773
ADU34719.1
KEGG: bph:Bphy_4341 hypothetical protein.
       0.752
ADU34720.1
KEGG: vei:Veis_0243 hypothetical protein.
       0.752
ADU34718.1
KEGG: hna:Hneap_2318 hypothetical protein.
       0.707
ADU34717.1
KEGG: swd:Swoo_0756 hypothetical protein.
       0.584
ADU34723.1
PFAM: type II and III secretion system protein; KEGG: hna:Hneap_2310 type II and III secretion system protein; Belongs to the bacterial secretin family.
       0.568
ADU34724.1
KEGG: hna:Hneap_2309 FHA domain containing protein; PFAM: type II secretion system protein E; Forkhead-associated protein; SMART: Forkhead-associated protein.
       0.528
ADU34725.1
PFAM: Type II secretion system F domain; KEGG: bph:Bphy_4347 type II secretion system protein.
       0.528
ADU34726.1
PFAM: Type II secretion system F domain; KEGG: slo:Shew_0642 type II secretion system protein.
       0.524
ADU34727.1
PFAM: protein of unknown function DUF192; KEGG: slo:Shew_0641 hypothetical protein.
       0.493
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.