STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU34829.1KEGG: vap:Vapar_5632 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase. (221 aa)    
Predicted Functional Partners:
ADU34830.1
PFAM: FAD dependent oxidoreductase; KEGG: vap:Vapar_5633 FAD dependent oxidoreductase.
 
  
 0.924
ADU36411.1
KEGG: bpt:Bpet4011 haloacid dehalogenase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase.
  
  
  0.924
ADU36171.1
KEGG: vap:Vapar_1787 alpha/beta hydrolase fold protein; manually curated; PFAM: alpha/beta hydrolase fold.
  
 
 0.910
ADU34843.1
Haloacid dehalogenase, type II; KEGG: pam:PANA_1814 hypothetical protein; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase.
  
  
 
0.903
ADU38450.1
KEGG: vap:Vapar_3706 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase.
     
  0.900
ADU34831.1
PFAM: extracellular solute-binding protein family 5; KEGG: vap:Vapar_5634 extracellular solute-binding protein family 5.
 
     0.882
ADU34832.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_5635 binding-protein-dependent transport systems inner membrane component.
 
    0.828
ADU34833.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_5636 binding-protein-dependent transport systems inner membrane component.
 
     0.821
ADU34840.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_0054 GCN5-related N-acetyltransferase.
 
     0.815
ADU34839.1
PFAM: FAD dependent oxidoreductase; KEGG: psb:Psyr_2637 FAD dependent oxidoreductase.
 
  
 0.811
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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