STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU34901.1PFAM: metallophosphoesterase; KEGG: vap:Vapar_1653 metallophosphoesterase. (260 aa)    
Predicted Functional Partners:
ADU34902.1
KEGG: vap:Vapar_1652 hypothetical protein.
 
     0.891
ADU37220.1
KEGG: aav:Aave_4018 hypothetical protein.
  
     0.558
ADU37248.1
KEGG: rce:RC1_0532 hypothetical protein.
  
     0.557
ADU37245.1
KEGG: scl:sce6774 glycosyltransferase; manually curated; PFAM: glycosyl transferase group 1.
  
     0.555
ADU37235.1
KEGG: mno:Mnod_0134 hypothetical protein.
  
     0.551
ADU37247.1
KEGG: ote:Oter_1139 hypothetical protein.
  
     0.548
ADU37219.1
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: aav:Aave_4017 alcohol dehydrogenase.
 
     0.537
ADU37246.1
KEGG: afw:Anae109_3221 hypothetical protein.
  
     0.526
ADU37080.1
PFAM: Methyltransferase type 11; KEGG: vap:Vapar_4270 methyltransferase type 11.
  
     0.522
ADU37249.1
PFAM: Methyltransferase type 11; KEGG: geo:Geob_3248 methyltransferase type 11.
  
     0.522
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.