STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU34951.1TIGRFAM: acetyl-CoA acetyltransferase; KEGG: vap:Vapar_5341 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)    
Predicted Functional Partners:
ADU35055.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: vap:Vapar_0812 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
  
 0.975
ADU35098.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: vap:Vapar_0844 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.975
ADU37372.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: vap:Vapar_2925 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
 
 0.975
ADU34952.1
KEGG: vap:Vapar_5342 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR.
 
 0.970
ADU35800.1
PFAM: acyl-CoA dehydrogenase domain-containing protein; protein of unknown function DUF1974; KEGG: vap:Vapar_1437 protein of unknown function DUF1974.
  
 0.933
ADU39527.1
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: vap:Vapar_4730 acyl-CoA dehydrogenase domain protein.
  
 0.933
ADU34344.1
KEGG: vap:Vapar_0107 acetoacetyl-CoA synthetase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase.
  
 
 0.931
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
 0.923
ADU36583.1
TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: vap:Vapar_3261 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
  
 
 0.923
ADU36582.1
TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: vap:Vapar_3262 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase.
  
 
 0.921
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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