STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU35004.1PFAM: glycosyl transferase family 2; KEGG: bcj:BCAL3128 glycosyltransferase. (390 aa)    
Predicted Functional Partners:
ADU35005.1
PFAM: glycosyl transferase group 1; KEGG: cyp:PCC8801_2933 glycosyl transferase family 2.
 
 
 0.867
ADU35003.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: swi:Swit_0792 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.838
ADU35765.1
PFAM: Methyltransferase type 12; KEGG: tin:Tint_1186 glycosyl transferase family 2.
 
 
 0.794
ADU35012.1
PFAM: glycosyl transferase family 2; KEGG: vap:Vapar_0769 glycosyl transferase family 2.
 
  
 0.779
ADU35002.1
TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: fba:FIC_00352 acetyltransferase.
  
  
 0.682
ADU35311.1
KEGG: vap:Vapar_1192 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.646
ADU36154.1
PFAM: CsbD family protein; KEGG: vap:Vapar_1771 CsbD family protein; Belongs to the UPF0337 (CsbD) family.
   
    0.622
ADU36508.1
PFAM: protein of unknown function DUF1501; KEGG: vap:Vapar_3315 protein of unknown function DUF1501.
   
    0.537
ADU35006.1
PFAM: acyltransferase 3; KEGG: bph:Bphy_2300 acyltransferase 3.
     
 0.535
ADU35007.1
PFAM: acyltransferase 3; KEGG: bpy:Bphyt_6708 acyltransferase 3.
     
 0.535
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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