STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU35058.1KEGG: vap:Vapar_0815 putative hydrolase. (305 aa)    
Predicted Functional Partners:
ADU35059.1
KEGG: vap:Vapar_0816 hypothetical protein.
       0.699
ADU35062.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vap:Vapar_0820 enoyl-CoA hydratase.
       0.684
ADU35060.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_0817 short-chain dehydrogenase/reductase SDR.
       0.679
ADU35061.1
PFAM: DSBA oxidoreductase; KEGG: vap:Vapar_0819 DsbA oxidoreductase.
 
     0.677
ADU39190.1
KEGG: vap:Vapar_4378 protein of unknown function DUF962.
  
     0.532
ADU35055.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: vap:Vapar_0812 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
       0.517
ADU35057.1
KEGG: vap:Vapar_0814 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
       0.510
ADU35054.1
PFAM: Protein of unknown function DUF2147; KEGG: vap:Vapar_0811 hypothetical protein.
 
     0.481
ADU35056.1
KEGG: vap:Vapar_0813 protein of unknown function DUF559.
       0.470
ADU34421.1
KEGG: aav:Aave_4189 triacylglycerol lipase; PFAM: alpha/beta hydrolase fold.
  
     0.454
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.