STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU35063.1PFAM: Extracellular ligand-binding receptor; KEGG: vap:Vapar_0821 extracellular ligand-binding receptor. (385 aa)    
Predicted Functional Partners:
ADU34382.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_5148 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.827
ADU36132.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_1749 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.818
ADU36131.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_1748 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.790
ADU34383.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_5149 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.783
ADU36133.1
KEGG: vap:Vapar_1750 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.707
ADU34381.1
KEGG: pol:Bpro_5147 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.674
ADU36134.1
KEGG: vap:Vapar_1751 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.666
ADU38169.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_3483 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.654
ADU38170.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_3484 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.634
ADU35537.1
KEGG: vap:Vapar_1228 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.629
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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