STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU35090.1KEGG: vap:Vapar_0836 hypothetical protein. (333 aa)    
Predicted Functional Partners:
ADU35562.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: vap:Vapar_1251 protein of unknown function DUF112 transmembrane.
 
  
 0.788
ADU34568.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: vap:Vapar_0317 protein of unknown function DUF112 transmembrane.
 
  
 0.787
ADU36665.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: vap:Vapar_6378 protein of unknown function DUF112 transmembrane.
 
  
 0.787
ADU37725.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: rme:Rmet_5653 hypothetical protein.
 
  
 0.787
ADU37638.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: vap:Vapar_3008 protein of unknown function DUF112 transmembrane.
 
  
 0.698
ADU39360.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: vap:Vapar_4491 protein of unknown function DUF112 transmembrane.
 
  
 0.698
ADU35088.1
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: vap:Vapar_3373 electron transfer flavoprotein alpha subunit.
       0.671
ADU35089.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: vap:Vapar_3374 electron transfer flavoprotein alpha/beta-subunit.
       0.671
ADU35091.1
PFAM: AMP-dependent synthetase and ligase; KEGG: vap:Vapar_0837 AMP-dependent synthetase and ligase.
       0.661
ADU35087.1
PFAM: 2-nitropropane dioxygenase NPD; KEGG: rme:Rmet_5434 2-nitropropane dioxygenase NPD.
       0.655
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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