STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU35117.1KEGG: vap:Vapar_0858 putative transmembrane protein. (241 aa)    
Predicted Functional Partners:
pyrC
Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
       0.818
ADU35116.1
KEGG: vap:Vapar_0857 protein of unknown function DUF88.
       0.802
ADU35115.1
KEGG: vap:Vapar_0855 protein of unknown function DUF88.
       0.735
ADU37410.1
ZipA FtsZ-binding region protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.649
htpX
PFAM: peptidase M48 Ste24p; KEGG: vap:Vapar_0859 heat shock protein HtpX; Belongs to the peptidase M48B family.
       0.620
ADU37492.1
KEGG: vap:Vapar_2620 hypothetical protein.
  
     0.602
ADU39215.1
PFAM: Protein of unknown function DUF2244, transmembrane; KEGG: vap:Vapar_4393 putative transmembrane protein.
  
     0.582
ADU36029.1
PFAM: Protein of unknown function DUF2069, membrane; KEGG: vap:Vapar_1669 membrane protein-like protein.
  
     0.563
ADU35113.1
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: svi:Svir_11630 metalloendopeptidase-like membrane protein.
       0.553
ADU39249.1
PFAM: Protein of unknown function DUF2244, transmembrane; KEGG: bac:BamMC406_2765 integral membrane protein-like protein.
  
     0.542
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.