STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU35332.1KEGG: vap:Vapar_1045 sugar ABC transporter, periplasmic sugar-binding protein. (356 aa)    
Predicted Functional Partners:
ADU35334.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_1047 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
ADU35333.1
KEGG: vap:Vapar_1046 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.995
ADU35335.1
KEGG: vap:Vapar_1048 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.982
ADU35337.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_1050 inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.976
ADU35331.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vap:Vapar_1044 periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.864
ADU35336.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_1049 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.757
ADU39890.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_5023 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.748
ADU35023.1
KEGG: vei:Veis_1536 putative simple sugar transport system substrate-binding protein.
 
  
 0.466
ADU35330.1
PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_1043 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.437
ADU35329.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_1042 transcriptional regulator, LysR family.
 
     0.427
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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