STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU35522.16-phosphogluconolactonase; KEGG: rsl:RPSI07_3329 putative 6-phosphogluconolactonase (pgl). (419 aa)    
Predicted Functional Partners:
ADU36070.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
 
  
 0.928
ADU35512.1
KEGG: rba:RB3641 putative cycloisomerase.
  
  
 
0.925
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.924
ADU36099.1
KEGG: vap:Vapar_1718 6-phosphogluconolactonase.
  
  
 
0.923
ADU39058.1
KEGG: vap:Vapar_6143 gluconate kinase; TIGRFAM: gluconate kinase; PFAM: Carbohydrate kinase, FGGY-like; Belongs to the FGGY kinase family.
 
  
 0.917
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
     
 0.901
ADU35523.1
PFAM: Berberine/berberine domain protein; FAD linked oxidase domain protein; KEGG: rsc:RCFBP_21395 putative FAD linked oxidase oxidoreductase protein.
 
     0.847
ADU39081.1
Manually curated; KEGG: vap:Vapar_0704 fibronectin type III domain protein.
  
     0.531
ADU35524.1
PFAM: shikimate kinase; KEGG: bur:Bcep18194_B2301 hypothetical protein.
 
   
 0.522
ADU34924.1
Hypothetical protein; KEGG: kfl:Kfla_4274 PKD domain containing protein.
  
     0.458
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.