Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADU35873.1KEGG: vap:Vapar_1507 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (243 aa)    
Predicted Functional Partners:
ADU35871.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_1505 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.953
ADU35872.1
KEGG: vap:Vapar_1506 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.932
ADU39773.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_4939 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.879
ADU36313.1
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4064 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.858
ADU35606.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_2104 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.856
ADU34605.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_0364 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.837
ADU35036.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_0794 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.837
ADU34320.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_0085 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.823
ADU35605.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_1288 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.819
ADU39774.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_4940 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.815
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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