STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36025.1TIGRFAM: nitrile hydratase, alpha subunit; KEGG: vap:Vapar_1665 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain. (225 aa)    
Predicted Functional Partners:
ADU36026.1
Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
 
 
 0.999
ADU36027.1
KEGG: vap:Vapar_1667 hypothetical protein.
 
   
 0.955
ADU35067.1
PFAM: Amidase; KEGG: vap:Vapar_0825 amidase.
 
  
  0.932
amiE
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates.
  
  
 0.920
ADU39112.1
PFAM: Amidase; KEGG: vap:Vapar_0709 amidase.
 
  
  0.918
ADU37570.1
KEGG: vap:Vapar_2541 nitrilase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
     
 0.916
ADU34818.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: vap:Vapar_0561 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
     
 0.912
ADU36596.1
PFAM: Amidase; KEGG: bra:BRADO4407 putative amidase.
    
  0.903
ADU39525.1
PFAM: Amidase; KEGG: dar:Daro_1337 indole acetimide hydrolase; Belongs to the amidase family.
    
  0.903
ADU35107.1
PFAM: Amidase; KEGG: vap:Vapar_0848 amidase; Belongs to the amidase family.
    
  0.902
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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