STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36172.1TIGRFAM: tartrate dehydrogenase; KEGG: vap:Vapar_1788 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase. (361 aa)    
Predicted Functional Partners:
ADU36656.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: vap:Vapar_5478 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
     
 0.906
ADU40117.1
TIGRFAM: tartrate dehydrogenase; KEGG: vap:Vapar_1027 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase.
  
  
 
0.906
ADU36657.1
KEGG: vap:Vapar_5477 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein.
   
 
 0.904
ADU34835.1
TIGRFAM: tartrate dehydrogenase; KEGG: vap:Vapar_5638 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase.
  
  
 
0.901
ADU38515.1
TIGRFAM: tartrate dehydrogenase; KEGG: pfl:PFL_3649 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase.
  
  
 
0.901
ADU36752.1
KEGG: vap:Vapar_2369 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein.
  
 0.860
ADU36171.1
KEGG: vap:Vapar_1787 alpha/beta hydrolase fold protein; manually curated; PFAM: alpha/beta hydrolase fold.
   
 0.826
ADU36751.1
KEGG: vap:Vapar_2368 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein.
 
 0.777
ADU35040.1
Homoaconitate hydratase family protein; KEGG: vap:Vapar_0798 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein.
 
 0.771
ADU34549.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: vap:Vapar_0313 thiamine pyrophosphate protein; Belongs to the TPP enzyme family.
  
 0.747
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.