STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36195.1Putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: aav:Aave_2335 putative phage repressor; Belongs to the peptidase S24 family. (243 aa)    
Predicted Functional Partners:
ADU36189.1
KEGG: mrd:Mrad2831_5739 ERF family protein; manually curated; PFAM: ERF family protein.
 
     0.578
ADU37659.1
PFAM: SdiA-regulated domain protein; KEGG: pap:PSPA7_0418 hypothetical protein.
  
     0.498
ADU36194.1
Hypothetical protein.
       0.458
ADU36626.1
PFAM: GTP-binding protein HSR1-related; KEGG: vap:Vapar_3226 GTP-binding protein HSR1-related.
 
     0.450
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.