STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36219.1KEGG: vpa:VP1564 hypothetical protein. (483 aa)    
Predicted Functional Partners:
ADU34278.1
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: vap:Vapar_0050 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
  
 
 0.610
ADU38332.1
KEGG: aba:Acid345_1094 ParB-like partition proteins; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease.
  
 
 0.610
ADU36220.1
KEGG: aav:Aave_1702 hypothetical protein.
       0.523
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.450
ADU36221.1
KEGG: aav:Aave_1703 putative phage associated protein.
       0.441
ADU40080.1
KEGG: vap:Vapar_5200 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase.
     
 0.433
ADU37564.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: vap:Vapar_2547 TonB-dependent receptor plug.
    
 
 0.402
ADU38461.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vap:Vapar_3717 TonB-dependent receptor.
    
 
 0.402
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.