STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36220.1KEGG: aav:Aave_1702 hypothetical protein. (384 aa)    
Predicted Functional Partners:
ADU36221.1
KEGG: aav:Aave_1703 putative phage associated protein.
       0.639
ADU36219.1
KEGG: vpa:VP1564 hypothetical protein.
       0.523
ADU36222.1
KEGG: aav:Aave_1704 putative phage associated protein.
       0.499
ADU36223.1
KEGG: aav:Aave_1705 putative phage associated protein.
       0.401
ADU36224.1
KEGG: aav:Aave_1706 hypothetical protein.
       0.401
ADU36225.1
KEGG: sml:Smlt1965 hypothetical protein.
       0.401
ADU36226.1
KEGG: aav:Aave_1710 hypothetical protein.
       0.401
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.