STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36320.1PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: azl:AZL_000060 NADPH2:quinone reductase. (327 aa)    
Predicted Functional Partners:
ADU36321.1
KEGG: rme:Rmet_6647 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.773
ADU36319.1
PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A2123 glutathione S-transferase-like protein.
   
 
 0.763
ADU36322.1
PFAM: extracellular solute-binding protein family 1; KEGG: bbr:BB2069 putative extracellular solute-binding protein.
       0.521
ADU36323.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpe:BP2552 ABC transport protein, solute-binding protein.
       0.521
ADU38495.1
PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; phosphopantetheine-binding; KEGG: vap:Vapar_3745 KR domain protein.
 
 
 0.515
ADU36324.1
KEGG: bbr:BB2071 ABC transport protein, ATP-binding component; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.454
ADU36325.1
PFAM: Carboxylesterase type B; KEGG: pzu:PHZ_c0958 carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.
   
 
 0.437
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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