STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36333.1PFAM: Protein of unknown function DUF2501; KEGG: vap:Vapar_1845 hypothetical protein. (137 aa)    
Predicted Functional Partners:
ADU38459.1
PFAM: OmpA/MotB domain protein; KEGG: vap:Vapar_3714 OmpA/MotB domain protein.
  
     0.644
ADU36332.1
PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: vap:Vapar_1844 sulphate transporter.
       0.561
ADU36334.1
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_5278 peptidase M20.
       0.539
ADU36331.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_0285 LysR family transcriptional regulator.
       0.524
ADU39251.1
KEGG: vap:Vapar_4461 hypothetical protein.
  
     0.516
ADU37446.1
KEGG: ent:Ent638_1543 putative lipoprotein.
  
     0.512
ADU34423.1
KEGG: vap:Vapar_0172 hypothetical protein.
  
     0.480
ADU39324.1
Hypothetical protein; KEGG: vap:Vapar_5314 putative membrane protein involved in toxin uptake.
  
     0.461
ADU34287.1
KEGG: vap:Vapar_0059 hypothetical protein.
  
     0.456
ADU34485.1
PFAM: O-antigen polymerase; KEGG: vap:Vapar_0257 O-antigen polymerase.
 
     0.451
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.