STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36338.1PFAM: phosphoesterase PA-phosphatase related; KEGG: vap:Vapar_1848 phosphoesterase, PA-phosphatase related. (236 aa)    
Predicted Functional Partners:
ADU36337.1
PFAM: phosphopantetheine-binding; KEGG: vap:Vapar_1847 phosphopantetheine-binding.
 
 
 0.778
ADU37424.1
KEGG: vap:Vapar_2670 putative transmembrane protein.
 
     0.774
ADU37908.1
KEGG: vap:Vapar_2168 hypothetical protein.
 
     0.752
ADU37417.1
KEGG: vap:Vapar_2677 potential 3-hydroxydecyl-(acyl carrier protein) dehydratase.
 
     0.738
ADU37421.1
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.736
ADU37420.1
KEGG: vap:Vapar_2674 hypothetical protein.
 
     0.729
ADU36903.1
PFAM: Endoribonuclease L-PSP; KEGG: vap:Vapar_2681 endoribonuclease L-PSP.
 
     0.718
ADU36901.1
PFAM: glycosyl transferase family 2; KEGG: vap:Vapar_2679 glycosyl transferase family 2.
 
  
 0.712
ADU34489.1
KEGG: vap:Vapar_0261 hypothetical protein.
 
  
 0.700
ADU37422.1
KEGG: vap:Vapar_2672 hypothetical protein.
 
     0.673
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.