STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36352.1PFAM: protein of unknown function DUF72; KEGG: pna:Pnap_0190 hypothetical protein. (248 aa)    
Predicted Functional Partners:
ADU36353.1
KEGG: ajs:Ajs_3974 hypothetical protein.
       0.705
ADU36350.1
KEGG: cti:RALTA_B0680 putative alcool deshydrogenase; TIGRFAM: phosphonate metabolism-associated iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase.
       0.687
ADU36351.1
KEGG: cti:RALTA_B1648 aldehyde dehydrogenase; TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.686
ADU36354.1
KEGG: vap:Vapar_3457 hypothetical protein.
       0.681
ADU36349.1
KEGG: pol:Bpro_4692 phosphonoacetate hydrolase; TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase.
       0.675
ADU36346.1
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: dac:Daci_2408 phosphonate ABC transporter, periplasmic phosphonate-binding protein.
       0.671
phnC
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
       0.671
ADU36348.1
KEGG: ppg:PputGB1_3257 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
       0.671
ADU36355.1
PFAM: regulatory protein TetR; KEGG: vap:Vapar_3456 transcriptional regulator, TetR family.
       0.542
ADU36345.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: hse:Hsero_2623 LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
       0.422
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.