STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36362.1PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: vap:Vapar_6356 polypeptide-transport-associated domain protein ShlB-type. (133 aa)    
Predicted Functional Partners:
ADU38106.1
KEGG: vap:Vapar_4525 filamentous hemagglutinin family outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein.
 
 
 0.835
ADU39718.1
PFAM: Fimbrial protein domain-containing protein; KEGG: sml:Smlt0709 putative fimbria adhesin protein precursor.
  
  
 0.667
ADU36496.1
KEGG: xca:xccb100_2325 putative filamentous hemagglutinin-related protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin.
  
 
 0.665
ADU39719.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bma:BMA1023 outer membrane usher protein.
   
  
 0.655
ADU39720.1
PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: bpr:GBP346_A2159 fimbrial assembly chaperone protein.
   
  
 0.594
ADU39680.1
KEGG: rsl:RPSI07_mp0665 conserved membrane protein of unknown function.
 
     0.543
ADU34621.1
Putative signal transduction histidine kinase; KEGG: vap:Vapar_0380 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
  
     0.531
ADU36975.1
KEGG: sjp:SJA_C1-07050 P pilus assembly protein, chaperone PapD.
   
  
 0.509
ADU35888.1
KEGG: vei:Veis_4946 hypothetical protein.
  
     0.425
ADU36363.1
KEGG: bpl:BURPS1106A_1130 hypothetical protein.
       0.417
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.