STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36368.1KEGG: ank:AnaeK_4229 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (275 aa)    
Predicted Functional Partners:
ADU34350.1
KEGG: pfl:PFL_1558 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.693
ADU38789.1
Transcriptional regulator, AraC family; KEGG: scl:sce1410 putative AraC-like transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; protein of unknown function DUF861 cupin_3; SMART: Helix-turn-helix, AraC domain.
  
     0.613
ADU35125.1
KEGG: rme:Rmet_1604 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.601
ADU36367.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: smd:Smed_2231 short-chain dehydrogenase/reductase SDR.
 
     0.589
ADU37873.1
KEGG: vap:Vapar_2202 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.576
ADU37569.1
KEGG: vap:Vapar_2542 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.565
ADU35150.1
Transcriptional regulator, AraC family; KEGG: pol:Bpro_0629 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.564
ADU34581.1
KEGG: vap:Vapar_0345 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.529
ADU38659.1
KEGG: vap:Vapar_3884 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.512
ADU38663.1
KEGG: vap:Vapar_3892 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
 
 0.506
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.