STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36407.1PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: vap:Vapar_3413 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding. (327 aa)    
Predicted Functional Partners:
ADU36406.1
PFAM: PfkB domain protein; KEGG: vap:Vapar_3414 PfkB domain protein.
 
 
 0.989
ADU38701.1
KEGG: vap:Vapar_3921 hydroxypyruvate reductase; PFAM: MOFRL domain protein.
 
 0.939
ADU39508.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vap:Vapar_4717 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
 
  
0.923
ADU38737.1
TIGRFAM: hydroxypyruvate isomerase; KEGG: vap:Vapar_3955 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the hyi family.
  
 
 0.920
ADU37347.1
PFAM: aminotransferase class V; KEGG: vap:Vapar_2906 aminotransferase class V.
  
 
 0.919
ADU38738.1
TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: vap:Vapar_3956 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding.
 
  
 0.918
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.916
ADU36485.1
KEGG: vap:Vapar_3337 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding.
 
  
 0.916
ADU34827.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vap:Vapar_5630 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
 
  
0.914
ADU36157.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: vap:Vapar_1774 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
  
  
 
0.913
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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