STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36435.1KEGG: aav:Aave_0609 extracellular solute-binding protein. (576 aa)    
Predicted Functional Partners:
ADU36433.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_3393 binding-protein-dependent transport systems inner membrane component.
 
 0.994
ADU36430.1
KEGG: vap:Vapar_3396 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.988
ADU36431.1
KEGG: vap:Vapar_3395 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.988
ADU36432.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_3394 binding-protein-dependent transport systems inner membrane component.
 
 0.988
ADU36434.1
PFAM: Protein of unknown function DUF2160, transmembrane; KEGG: vap:Vapar_3392 putative integral membrane protein.
 
     0.911
ADU36429.1
KEGG: vap:Vapar_3397 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.629
ADU36428.1
KEGG: vap:Vapar_3398 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR.
 
   
 0.618
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 
 0.518
ADU35411.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1110 binding-protein-dependent transport systems inner membrane component.
  
 
 0.515
ADU39543.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1260 binding-protein-dependent transport systems inner membrane component.
  
 
 0.512
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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