STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36451.1PFAM: MscS Mechanosensitive ion channel; KEGG: vap:Vapar_3375 MscS mechanosensitive ion channel. (431 aa)    
Predicted Functional Partners:
ADU36450.1
PFAM: histone deacetylase superfamily; KEGG: vap:Vapar_3376 histone deacetylase.
       0.721
ADU36449.1
KEGG: vap:Vapar_3377 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase.
 
     0.586
ADU36448.1
PFAM: protein of unknown function DUF58; KEGG: vap:Vapar_3378 protein of unknown function DUF58.
       0.552
ADU39590.1
PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pol:Bpro_0447 multiple antibiotic resistance (MarC)-related proteins.
 
    0.509
ADU36452.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: vap:Vapar_3374 electron transfer flavoprotein alpha/beta-subunit.
       0.507
ADU36453.1
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: vap:Vapar_3373 electron transfer flavoprotein alpha subunit.
       0.506
ADU39767.1
PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: vap:Vapar_4933 multiple antibiotic resistance (MarC)-related protein.
 
    0.491
ADU35982.1
KEGG: vap:Vapar_1610 hypothetical protein.
  
     0.428
ADU34713.1
rRNA (guanine-N(2)-)-methyltransferase; KEGG: vap:Vapar_0473 putative RNA methylase; PFAM: RNA methylase; THUMP domain-containing protein; Belongs to the methyltransferase superfamily.
 
    0.419
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
    0.417
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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