STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36461.1PFAM: MaoC domain protein dehydratase; KEGG: ctt:CtCNB1_1712 MaoC-like dehydratase. (139 aa)    
Predicted Functional Partners:
ADU36460.1
KEGG: ctt:CtCNB1_1713 MaoC-like dehydratase.
     0.984
ADU36459.1
PFAM: Thiolase-like; KEGG: ctt:CtCNB1_1714 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.880
ADU36462.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ctt:CtCNB1_1711 short-chain dehydrogenase/reductase SDR.
 
 0.826
ADU36463.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_A0873 enoyl-CoA hydratase/carnithine racemase.
  
 0.766
ADU36458.1
PFAM: AMP-dependent synthetase and ligase; KEGG: rpf:Rpic12D_4691 AMP-dependent synthetase and ligase.
     
 0.570
ADU35059.1
KEGG: vap:Vapar_0816 hypothetical protein.
  
 
 0.530
ADU34756.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.504
ADU37209.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.504
ADU40086.1
KEGG: psb:Psyr_1393 hypothetical protein.
   
 0.502
ADU36457.1
KEGG: rpi:Rpic_2633 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.501
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.