STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36832.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_2995 transcriptional regulator, LysR family. (316 aa)    
Predicted Functional Partners:
ADU39326.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_4463 transcriptional regulator, LysR family.
  
     0.650
ADU34374.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cti:RALTA_A0206 putative transcriptional regulator, LysR family.
  
     0.594
ADU34477.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpf:Rpic12D_1450 transcriptional regulator, LysR family.
  
     0.582
ADU36833.1
PFAM: FAD dependent oxidoreductase; KEGG: vap:Vapar_2994 FAD dependent oxidoreductase.
       0.579
ADU35408.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_1107 transcriptional regulator, LysR family.
  
     0.572
ADU39012.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_4236 transcriptional regulator, LysR family.
  
     0.570
ADU39555.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_4752 transcriptional regulator, LysR family.
  
     0.550
ADU38370.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B2910 LysR family transcriptional regulator.
  
     0.544
ADU39171.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_4358 transcriptional regulator, LysR family.
  
     0.542
ADU36040.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_1682 transcriptional regulator, LysR family.
  
     0.530
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.