STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU36934.1Hypothetical protein; KEGG: pde:Pden_2201 phosphoribosylaminoimidazole carboxylase ATPase subunit. (115 aa)    
Predicted Functional Partners:
ADU36932.1
KEGG: ank:AnaeK_3013 peptidase M48 Ste24p.
       0.773
ADU36933.1
Hypothetical protein; KEGG: cwo:Cwoe_3186 single-stranded-DNA-specific exonuclease RecJ.
       0.773
ADU36931.1
Hypothetical protein; KEGG: sbp:Sbal223_1258 permease YjgP/YjgQ family protein.
       0.500
ADU36935.1
Hypothetical protein; KEGG: dia:Dtpsy_0362 diguanylate cyclase with PAS/PAC sensor.
       0.469
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.