STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37065.1KEGG: vap:Vapar_0776 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (353 aa)    
Predicted Functional Partners:
ADU35616.1
KEGG: vap:Vapar_1299 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
 
  
 0.934
ADU37229.1
PFAM: glycosyl transferase group 1; glycoside hydrolase family 1; amine oxidase; KEGG: nmu:Nmul_A2150 amine oxidase.
    
 0.932
ADU37237.1
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: rpf:Rpic12D_0578 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase.
  
 
 0.912
ADU39810.1
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: xcv:XCV1594 UDP-glucose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase.
  
 
 0.912
ADU37066.1
PFAM: glycosyl transferase group 1; KEGG: vap:Vapar_3198 glycosyl transferase group 1.
     
 0.791
ADU37064.1
Hypothetical protein.
       0.773
ADU37067.1
KEGG: vap:Vapar_3197 polysaccharide biosynthesis protein.
       0.663
ADU37068.1
KEGG: vap:Vapar_3196 hypothetical protein.
       0.663
ADU37061.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: vap:Vapar_3200 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase.
 
  
 0.662
ADU37063.1
KEGG: vap:Vapar_3199 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver.
     
 0.614
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.