STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37086.1KEGG: vap:Vapar_2866 hypothetical protein. (141 aa)    
Predicted Functional Partners:
ADU37087.1
TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: vap:Vapar_2865 type VI secretion system Vgr family protein.
       0.782
ADU37083.1
KEGG: vap:Vapar_2869 hypothetical protein.
       0.763
ADU37084.1
PFAM: pentapeptide repeat protein; KEGG: vap:Vapar_2868 pentapeptide repeat protein.
       0.763
ADU37085.1
PFAM: Protein of unknown function DUF2169; pentapeptide repeat protein; KEGG: vap:Vapar_2867 pentapeptide repeat protein.
       0.763
ADU37082.1
KEGG: vap:Vapar_2870 hypothetical protein.
       0.596
ADU37088.1
Hypothetical protein.
       0.581
ADU37089.1
KEGG: vap:Vapar_0192 type VI secretion-associated protein, ImpA family; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein.
       0.426
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.