STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37100.1TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: vap:Vapar_0201 type VI secretion system Vgr family protein. (780 aa)    
Predicted Functional Partners:
ADU37096.1
KEGG: vap:Vapar_0199 type VI secretion protein, VC_A0111 family; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305.
 
  
 0.922
ADU37095.1
KEGG: vap:Vapar_0198 type VI secretion protein, VC_A0110 family; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879.
 
  
 0.902
ADU37090.1
KEGG: vap:Vapar_0193 type VI secretion protein, VC_A0107 family; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301.
 
  
 0.887
ADU37094.1
KEGG: vap:Vapar_0197 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein.
 
  
 0.879
ADU37092.1
PFAM: protein of unknown function DUF796; KEGG: vap:Vapar_0195 protein of unknown function DUF796.
 
  
 0.873
ADU37089.1
KEGG: vap:Vapar_0192 type VI secretion-associated protein, ImpA family; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein.
 
  
 0.872
ADU37091.1
KEGG: vap:Vapar_0194 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877.
 
  
 0.871
ADU37093.1
PFAM: virulence protein SciE type; KEGG: vap:Vapar_0196 virulence protein SciE type.
 
  
 0.864
ADU39430.1
KEGG: bpl:BURPS1106A_A0237 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU.
 
  
 0.862
ADU37097.1
TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: vap:Vapar_0200 type VI secretion ATPase, ClpV1 family; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.
 
  
 0.860
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.