STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37311.1KEGG: vap:Vapar_2890 3-demethylubiquinone-9 3-methyltransferase. (159 aa)    
Predicted Functional Partners:
ADU39233.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_4412 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.643
ADU39939.1
PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: pfl:PFL_4106 hypothetical protein.
  
    0.622
ADU39232.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_4410 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.601
ADU40113.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_5249 glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.588
ADU37874.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_2201 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.537
ADU37594.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: vap:Vapar_2523 NAD-dependent epimerase/dehydratase.
   
    0.534
ADU37312.1
KEGG: aav:Aave_3728 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; TonB-dependent receptor.
       0.479
ADU36465.1
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: vap:Vapar_3360 activator of HSP90 ATPase 1 family protein.
 
    0.452
ADU36615.1
Regulatory protein ArsR; KEGG: vap:Vapar_3232 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
     0.441
ADU34286.1
PFAM: bifunctional deaminase-reductase domain protein; KEGG: mlo:mll1872 hypothetical protein.
 
    0.402
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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