STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37323.1PFAM: Paraquat-inducible protein A; KEGG: vap:Vapar_2895 paraquat-inducible protein A. (214 aa)    
Predicted Functional Partners:
ADU37320.1
PFAM: protein of unknown function DUF330; KEGG: vap:Vapar_2892 protein of unknown function DUF330.
 
  
 0.960
ADU37321.1
PFAM: Mammalian cell entry related domain protein; KEGG: vap:Vapar_2893 mammalian cell entry related domain protein.
 
  
 0.958
ADU37322.1
PFAM: Paraquat-inducible protein A; KEGG: vap:Vapar_2894 paraquat-inducible protein A.
 
    
0.847
ADU37324.1
PFAM: major facilitator superfamily MFS_1; KEGG: vap:Vapar_2896 major facilitator superfamily MFS_1.
 
     0.761
ADU37325.1
KEGG: vap:Vapar_2897 drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1.
       0.729
ADU37319.1
KEGG: vap:Vapar_2891 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.
       0.482
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
   
    0.480
ADU37326.1
KEGG: bpd:BURPS668_A1241 hypothetical protein.
       0.461
ADU34451.1
KEGG: vap:Vapar_0225 hypothetical protein.
  
     0.457
ADU34230.1
KEGG: vap:Vapar_0007 hypothetical protein.
  
     0.401
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.