STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37378.1KEGG: vap:Vapar_2931 extracellular ligand-binding receptor. (409 aa)    
Predicted Functional Partners:
ADU37375.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_2928 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.988
ADU37376.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_2929 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.986
ADU37377.1
PFAM: Extracellular ligand-binding receptor; KEGG: vap:Vapar_2930 extracellular ligand-binding receptor.
 
  
 
0.942
ADU37374.1
KEGG: vap:Vapar_2927 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.867
ADU37373.1
KEGG: vap:Vapar_2926 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.783
ADU39562.1
PFAM: inner-membrane translocator; KEGG: bpt:Bpet3911 putative permease component of branched-chain amino acid transport system.
 
    0.706
ADU39563.1
PFAM: inner-membrane translocator; KEGG: bpt:Bpet3910 branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.705
ADU37624.1
PFAM: inner-membrane translocator; KEGG: vap:Vapar_2422 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.667
ADU37630.1
PFAM: Extracellular ligand-binding receptor; KEGG: vap:Vapar_2416 extracellular ligand-binding receptor.
  
     0.638
ADU37372.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: vap:Vapar_2925 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
 
     0.589
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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