STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37418.1PFAM: Methyltransferase type 11; KEGG: vap:Vapar_2676 methyltransferase type 11. (251 aa)    
Predicted Functional Partners:
ADU37423.1
PFAM: AMP-dependent synthetase and ligase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: vap:Vapar_2671 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ.
 
   
 0.947
ADU37420.1
KEGG: vap:Vapar_2674 hypothetical protein.
 
     0.946
ADU37417.1
KEGG: vap:Vapar_2677 potential 3-hydroxydecyl-(acyl carrier protein) dehydratase.
 
     0.945
ADU37421.1
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.943
ADU37422.1
KEGG: vap:Vapar_2672 hypothetical protein.
 
     0.942
ADU37424.1
KEGG: vap:Vapar_2670 putative transmembrane protein.
 
     0.935
ADU37419.1
PFAM: polysaccharide deacetylase; KEGG: vap:Vapar_2675 polysaccharide deacetylase.
 
   
 0.931
ADU37425.1
KEGG: vap:Vapar_2669 acyl carrier protein.
 
  
 0.909
ADU37416.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_2678 3-ketoacyl-(acyl-carrier-protein) reductase.
 
 
 
 0.869
ADU34489.1
KEGG: vap:Vapar_0261 hypothetical protein.
 
   0.780
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.