STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37590.1KEGG: vap:Vapar_2527 hypothetical protein. (168 aa)    
Predicted Functional Partners:
ADU35119.1
PFAM: Fertility inhibition FinO-like; KEGG: vap:Vapar_0862 ProQ activator of osmoprotectant transporter ProP.
  
     0.674
ADU38318.1
KEGG: vap:Vapar_3604 hypothetical protein.
  
     0.637
ADU35185.1
KEGG: vap:Vapar_0907 hypothetical protein.
  
     0.629
ADU34511.1
KEGG: vap:Vapar_0279 hypothetical protein.
  
     0.625
ADU38958.1
KEGG: vap:Vapar_4127 hypothetical protein.
  
     0.613
ADU39335.1
PFAM: protein of unknown function DUF490; KEGG: vap:Vapar_4471 protein of unknown function DUF490.
  
     0.600
ADU37695.1
KEGG: vap:Vapar_3096 hypothetical protein.
  
     0.592
ADU36702.1
KEGG: vap:Vapar_2324 exonuclease-like protein.
  
     0.582
ADU37027.1
KEGG: vap:Vapar_2734 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
     0.581
ADU34746.1
PFAM: sodium/hydrogen exchanger; KEGG: vap:Vapar_0491 sodium/hydrogen exchanger.
  
     0.563
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.