STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37717.1PFAM: peptidase M48 Ste24p; KEGG: pst:PSPTO_1350 hypothetical protein. (406 aa)    
Predicted Functional Partners:
ADU37718.1
Hypothetical protein; KEGG: reu:Reut_A1770 WGR.
 
     0.953
ADU39811.1
PFAM: glycosyl transferase family 2; KEGG: xca:xccb100_0642 glycosyltransferase.
  
 
   0.672
ADU34293.1
KEGG: bur:Bcep18194_B0391 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein.
  
     0.671
ADU34281.1
KEGG: vap:Vapar_0053 hypothetical protein.
  
     0.602
ADU35595.1
PFAM: peptidase M48 Ste24p; KEGG: vap:Vapar_1278 peptidase M48 Ste24p.
 
     0.580
ADU34631.1
KEGG: vap:Vapar_0385 hypothetical protein.
 
  
 0.567
ftsI-2
Peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
       0.565
ADU34423.1
KEGG: vap:Vapar_0172 hypothetical protein.
  
     0.528
ADU34690.1
KEGG: vap:Vapar_0449 hypothetical protein.
  
     0.526
ADU35795.1
KEGG: bvi:Bcep1808_3481 hypothetical protein.
  
     0.521
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.