STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37724.1KEGG: rme:Rmet_5652 hypothetical protein. (173 aa)    
Predicted Functional Partners:
ADU37725.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: rme:Rmet_5653 hypothetical protein.
 
  
 0.876
ADU37723.1
Histidine kinase; KEGG: bpa:BPP3784 two component sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain-containing protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
     0.633
ADU34594.1
KEGG: vap:Vapar_0357 hypothetical protein.
 
  
 0.632
ADU37348.1
KEGG: vap:Vapar_2907 hypothetical protein.
 
  
 0.609
ADU40106.1
KEGG: vap:Vapar_5223 hypothetical protein.
 
  
 0.595
ADU39302.1
KEGG: vap:Vapar_4438 hypothetical protein.
 
  
 0.564
ADU39897.1
KEGG: vap:Vapar_5035 hypothetical protein.
 
  
 0.561
ADU37722.1
Two component transcriptional regulator, winged helix family; KEGG: bpt:Bpet0665 two component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
 
     0.553
ADU35609.1
KEGG: vap:Vapar_1292 hypothetical protein.
 
  
 0.543
ADU38002.1
KEGG: vap:Vapar_2042 hypothetical protein.
 
  
 0.543
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.