STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37747.1TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: vap:Vapar_3142 UreA ABC transporter, ATP-binding protein UrtD; SMART: AAA ATPase. (247 aa)    
Predicted Functional Partners:
ADU37748.1
KEGG: vap:Vapar_3143 UreA ABC transporter, permease protein UrtC; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
ADU37749.1
KEGG: vap:Vapar_3144 UreA ABC transporter, permease protein UrtB; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
ADU37750.1
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: vap:Vapar_3145 UreA ABC transporter, UreA binding protein.
 
  
 0.988
ADU37746.1
TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: vap:Vapar_3141 UreA ABC transporter, ATP-binding protein UrtE; SMART: AAA ATPase.
 
 
0.982
ADU38812.1
KEGG: vap:Vapar_4010 UreA ABC transporter, permease protein UrtC; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.960
ADU38813.1
KEGG: vap:Vapar_4011 UreA ABC transporter, permease protein UrtB; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.960
ADU38814.1
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: vap:Vapar_4012 UreA ABC transporter, UreA binding protein.
 
  
 0.956
ADU37744.1
KEGG: vap:Vapar_3139 regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB.
 
     0.909
ADU38811.1
TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: vap:Vapar_4009 UreA ABC transporter, ATP-binding protein UrtD; SMART: AAA ATPase.
  
  
 
0.904
ADU37745.1
Formamidase; KEGG: vap:Vapar_3140 formamidase; PFAM: Acetamidase/Formamidase.
 
     0.871
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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