STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadXAspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate. (265 aa)    
Predicted Functional Partners:
ADU38925.1
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
    
 0.924
ADU38920.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
 0.908
ADU37778.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: vap:Vapar_3171 cupin 2 conserved barrel domain protein.
 
    0.895
ADU37771.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_3164 glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.890
ADU37774.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: vap:Vapar_3167 hypothetical protein; Belongs to the TPP enzyme family.
 
    0.886
ADU35634.1
TIGRFAM: aspartate carbamoyltransferase; KEGG: vap:Vapar_5513 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
  
  0.835
ADU37775.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_3168 short chain dehydrogenase.
 
     0.829
argG
TIGRFAM: argininosuccinate synthase; KEGG: vap:Vapar_3766 argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
   
 
  0.804
ADU34548.1
PFAM: aminotransferase class I and II; KEGG: vap:Vapar_0312 aminotransferase class I and II.
     
  0.800
ADU35069.1
PFAM: fumarate lyase; Fumarase C-like; KEGG: vap:Vapar_0827 fumarate lyase.
     
  0.800
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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