STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37775.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_3168 short chain dehydrogenase. (284 aa)    
Predicted Functional Partners:
ADU37774.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: vap:Vapar_3167 hypothetical protein; Belongs to the TPP enzyme family.
 
 0.941
ADU37778.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: vap:Vapar_3171 cupin 2 conserved barrel domain protein.
 
    0.910
ADU37771.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_3164 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.861
ADU37776.1
KEGG: vap:Vapar_3169 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR.
 
    0.843
nadX
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
     0.829
ADU37777.1
PFAM: alpha/beta hydrolase fold; KEGG: vap:Vapar_3170 alpha/beta hydrolase fold protein.
 
   0.827
ADU37767.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: vap:Vapar_3160 Rieske (2Fe-2S) domain protein.
 
     0.813
ADU37772.1
PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_3165 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   0.774
ADU37769.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: vap:Vapar_3162 monooxygenase FAD-binding.
 
    0.735
ADU37779.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_3172 short-chain dehydrogenase/reductase SDR.
 
    
0.717
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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